Ah yes...those clips. They are evil little bastards. In a perfect world, I believe they belong like your photo shows, but I can't get mine to hold the line. So, I pull the little tab far enough away from the frame and slip the brake line in to the large loop.
Here is a photo of the cross tube on my green Willys...

The clutch side is fairly self explanatory. From the frame...inward.
-Cotter Pin
-Large Washer
-Brake arm
-Large Washer
-Bracket Support (to Master Cylinder)
-Cotter Pin